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Sample information
Group [c2]
(5 samples)		   TCGA-CD-A4MH-01   TCGA-CG-5716-01   TCGA-CD-5804-01   TCGA-F1-6177-01   TCGA-BR-8486-01
Group [c1]
(5 samples)		   TCGA-VQ-A91W-01   TCGA-BR-8680-01   TCGA-SW-A7EB-01   TCGA-BR-6710-01   TCGA-IN-A6RI-01
Significant pathways


[21/95] pathways contains significant subpathways
MAPK signaling pathway (hsa04010)
Chemokine signaling pathway (hsa04062)
Cell cycle (hsa04110)
Oocyte meiosis (hsa04114)
Apoptosis (hsa04210)
Wnt signaling pathway (hsa04310)
Notch signaling pathway (hsa04330)
Axon guidance (hsa04360)
Focal adhesion (hsa04510)
Jak-STAT signaling pathway (hsa04630)
Neurotrophin signaling pathway (hsa04722)
Regulation of actin cytoskeleton (hsa04810)
Insulin signaling pathway (hsa04910)
Melanogenesis (hsa04916)
Type II diabetes mellitus (hsa04930)
Pathways in cancer (hsa05200)
Colorectal cancer (hsa05210)
Endometrial cancer (hsa05213)
Prostate cancer (hsa05215)
Acute myeloid leukemia (hsa05221)
Non-small cell lung cancer (hsa05223)

Drug repurposing [?]
None
Drugbank (The triangular compound term that is associated
with greater than or equal to genes)
Drugbank w/ drug-likeness (The triangular compound term that is associated
with greater than or equal to genes)
PharmGKB (The triangular drug term that is associated
with greater than or equal to genes)
PharmGKB w/ drug-likeness (The triangular drug term that is associated
with greater than or equal to genes)
Diseases (HGMD) (The triangular disease term that is
associated with greater than or equal to genes)
Layout options
Overlays Show the gene fold change of groups c2 over c1
Colors Overexpressed in c1 ← → Overexpressed in c2
Layout Automatic layout
Result visualization [?]
Network figure export [?]
Download & job description
Download results
* The file contains the network which can be imported into the Cytoscape.


* The file contains the network and the relevant drugs from DrugBank database, with q-value<0.05 by Fisher's exact test.. The file can be imported into the Cytoscape network tool.





Job ID0408055225
Original filenamePATHOME_TCGA_GC.sip.txt
Is the data log2-transformed?Yes
Date of submission2024-05-03 01:28:25
Date of last update2023-12-13 20:46:19
Job progress195/195 complete
Detail
Step 1Complete
Step 2Waiting...
Step 3Waiting...
Step 4Complete
Step 5Complete
Step 6Complete
Step 7Complete
Step 8Complete
Step 9Complete
Job management
PATHOME-Drug version 1.0
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